A Tool for Composition and Representation of Amino Acids of a Protein Sequence

Farhana Sarkhawas, R. K. Kamat

Abstract


The tool developed is a graphical representation of protein sequences, constructed based on the composition of amino acids and was displayed in the form of bar graph and line graph. There are many visualization tools available which displays the amino acids in the form of logos, p-h curves, coil etc. which are incomprehensible. The tool described in this paper first calculates the composition of amino acids given a protein sequence and then displays the bar and line graph. The graphical representation displayed by this tool not only avoids decadence, but also has simple and clear visualization no matter how long the sequences are.


Keywords


Amino Acids; Graph; Protein Sequence; Bar Graph; Line Graph

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